Haystack Analysis Web Server

Monet's Haystack

Web Server to perform Haystack Analysis, as described in:

Buehler, E. et al. siRNA off-target effects in genome-wide screens identify signaling pathway members. Sci. Rep. 2, 428; DOI:10.1038/srep00428 (2012).

The R code for performing this analysis can also be dowloaded by clicking here. It requires a relatively large amount of memory to run (~32 GB) but otherwise should present few difficulties for anyone accustomed to using a command line environment like UNIX.

Enter your email and select a CSV formatted file of RNAi seed sequences and assay values.


Problems, Questions, or Comments? Email: eugen.buehler@nih.gov